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Charge transfer sensitivity and dose efficiency with pixilated detectors and ptychographic phase contrast imaging in STEM

Abstract number:

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Meeting: The 16th European Microscopy Congress 2016

Session: Instrumentation and Methods

Topic: Phase Microscopies

Presentation Form: Poster

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Timothy Pennycook (1), Hao Yang (2, 3), Clemens Mangler (1), Stefen Hummel (1), Bernhard Bayer (1), Jani Kotakoski (1), Peter Nellist (2), Jannik Meyer (1)

1. Department of Physics, University of Vienna, Vienna, Autriche 2. Department of Materials, University of Oxford, Oxford, Royaume Uni 3. Now at Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, Etats-Unis

Keywords: charge transfer, dose efficiency, phase contrast, pixelated detectors, Ptychography, STEM

 Ptychography provides a sophisticated means of retrieving the complex object function via coherent diffractive imaging. It has become successfully established in the x-ray and visible light communities as a means of lensless imaging and for its super-resolution capability. Super-resolution was also the original use of the method in electron microscopy [1]. However the technique did not become popular in the high resolution electron microscopy community due to the difficulty of acquiring and processing the four dimensional datasets required. Recent advances in detector technology however have resulted in a resurgence of interest in the method. As aberration correction now provides atomic resolution in hardware without the need for super-resolution techniques, interest in ptychography in scanning transmission electron microscopy (STEM) has shifted towards achieving efficient phase contrast imaging.

 STEM provides sensitivity to atomic number via Z-contrast annular dark field (ADF) imaging. The approximately quadratic variation of the intensity in ADF images with atomic number provides relatively facile compositional interpretability as compared to phase contrast imaging. However a relatively small proportion of the beam current is scattered out to the high angles sampled by ADF detectors, particularly for thin samples composed of light elements. Most of the transmitted electrons are contained within the bright field (BF) disk. Ptychography has recently been shown to be more efficient than other phase contrast imaging methods used in STEM, including conventional BF, annular bright field (ABF), and differential phase contrast (DPC) [2,3]. It has also proven superior to these modes at revealing the positions of light elements hidden by the scattering of heavy elements in the ADF signal [4]. Furthermore, ptychographic phase imaging requires no aberrations to achieve contrast, meaning the electron probe can be tuned to maximum capability of the aberration corrector.

 Here we investigate the sensitivity of STEM ptychography for two different applications. The first makes use of the sensitivity of phase contrast imaging to electromagnetic fields to detect charge transfer. Such charge transfer sensitivity was demonstrated in conventional TEM by Meyer et. al. by making use of lens aberrations to reveal contrast changes in N-doped graphene and hexagonal boron nitride (hBN) that only matched with simulations based on potentials including the effects of charge transfer produced by density functional theory (DFT) and not the neutral atom potentials. We will present the results of testing charge transfer sensitivity in STEM with ptychography and various low dimensional materials. Figure 1 compares the projected potentials of (hBN) simulated with and without charge transfer. Figure 2 shows an example of simultaneously acquired ADF and ptychographic phase images of a region of single layer hBN surrounded by a double layer taken with the microscope fully tuned with the aberration corrector. As residual aberrations can affect phase images, we will also investigate the use of post acquisition aberration quantification and correction applied to ptychographic datasets of samples with the relatively subtle contrast effects of charge transfer.

 The second application of the sensitivity of STEM ptychography is its use for beam sensitive samples. We will assess the dose effectiveness of the method through simulations of varies samples, including biological samples frozen in amorphous ice, and compare to conventional TEM imaging. Consideration will be made of the pixelated detector technologies currently available, as the sensitivity and speed of the detector directly influence the dose effectiveness of the ptychographic phase images. 

[1] P.D. Nellist, B.C. McCallum and J.M. Rodenburg, Nature 374 (1995) 630-632.

[2] T.J. Pennycook et al., Ultramicroscopy 151 (2015) 160-167.

[3] H. Yang et al., Ultramicroscopy 151 (2015) 232-239.

[4] H. Yang et al., J. Phys.: Conf. Ser. 644 (2015) 012032.

[5] J.C. Meyer et al., Nature Materials 10 (2011) 209-215.

[6] The authors acknowledge support from the Austrian Science Fund (FWF) under grant number P25721-N20 and the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 655760 – DIGIPHASE.

Figures:

Figure 1: Projected potentials of hBN Fourier filtered to limit the resolution to just the first ring of spots from the independent atom model (IAM) in which no charge transfer occurs and the atoms are all neutrally charged and from using DFT to compute the effects of charge transfer. Charge transfer changes the screening of the nuclear potential and causes the B and N sites to have very similar contrast.

Figure 2: Experimental imaging of hBN. The ADF signal allows the B and N sites to be easily identified in the single layer region and the AB stacking to be identified in the double layer region of this CVD grown sample. The phase image shows contrast consistent with the DFT and charge transfer sensitivity in the single layer region.

To cite this abstract:

Timothy Pennycook, Hao Yang, Clemens Mangler, Stefen Hummel, Bernhard Bayer, Jani Kotakoski, Peter Nellist, Jannik Meyer; Charge transfer sensitivity and dose efficiency with pixilated detectors and ptychographic phase contrast imaging in STEM. The 16th European Microscopy Congress, Lyon, France. https://emc-proceedings.com/abstract/charge-transfer-sensitivity-and-dose-efficiency-with-pixilated-detectors-and-ptychographic-phase-contrast-imaging-in-stem/. Accessed: December 2, 2023
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